BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028A08SP1|AL428830
(492 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 700 0.0
>3x_Contig1619
Length = 7770
Score = 700 bits (344), Expect = 0.0
Identities = 351/357 (98%)
Strand = Plus / Plus
Query: 1 gtccaaccctacggttagacgatgccgcgtggggagttataaaaacgttcaacgactaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1247 gtccaaccctacggttagacgatgccgcgtggggagttataaaaacgttcaacgactaga 1306
Query: 61 taatgagttaggttaacaataatttatccacgagcgcccaatatcaaatagattatattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1307 taatgagttaggttaacaataatttatccacgagcgcccaatatcaaatagattatattt 1366
Query: 121 gataatgacatagtctgaacaatatagaaatatattgagctaatatattaaataaatatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1367 gataatgacatagtctgaacaatatagaaatatattgagctaatatattaaataaatatt 1426
Query: 181 aggccaacatatacagttgctttatcagaagctacaggattattctgtttaatgatttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1427 aggccaacatatacagttgctttatcagaagctacaggattattctgtttaatgatttca 1486
Query: 241 ttcttattattatacgctgtataataataatataatgaaatatctataataaaaatattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1487 ttcttattattatacgctgtataataataatataatgaaatatctataataaaaatattc 1546
Query: 301 tttttcatctttgggcaatgcctcccgggatatatatataababaabanmkatatat 357
||||||||||||||||||||||||||||||||||||||||| | || | ||||||
Sbjct: 1547 tttttcatctttgggcaatgcctcccgggatatatatataatataatatatatatat 1603
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 30,705
Number of Sequences: 1807
Number of extensions: 30705
Number of successful extensions: 8973
Number of sequences better than 1.0e-20: 1
length of query: 492
length of database: 10,358,551
effective HSP length: 15
effective length of query: 477
effective length of database: 10,331,446
effective search space: 4928099742
effective search space used: 4928099742
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.5 bits)
S1: 12 (24.9 bits)
S2: 49 (100.1 bits)